miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|182795832|gb|EW466250.2|EW466250 ATTCGGCACGAGGTGAACTTTTTTAGCAAGGAAAATGGAATCTGTGAAGAATTTTCGCTGATCGGAACCAAACAAGAAGG
CAATACTTACGATGTTAACTACGCAGGTAACAACAAATTTGTAGTTAGTTATGCGTCCGAAACTGCCCTGATAATCTCTA
ACATCAATGTGGATGAAGAAGGCGACAAAACCATAATGACGGGACTGTTGGGCAAAGGAACTGACATTGAAGACCAAGAT
TTGGAGAAGTTTAAAGAGGTGACAAGAGAGAACGGGATTCCAGAAGAAAATATTGTGAACATCATCAAACTGATGCAACA
CGAAGAACCAGGCATTGCCATTGCTCCATGGAATCAATACCAATGACCCACATGCCTGGTTCCTGCCTCTTATAATCCTG
CTCTGCCCATGATTATCCCACGTCCTCTCTCCTCATCCCTTAATCACATCCTCTGGGGTGGTC




Most similar to sp|P81245|OBP_PIG

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|P81245|OBP_PIG Odorant-binding protein OS=Sus scrofa PE=1 SV=1
          Length = 157

 Score =  197 bits (500), Expect = 3e-50
 Identities = 97/99 (97%), Positives = 99/99 (100%)
 Frame = +1

Query: 13  VNFFSKENGICEEFSLIGTKQEGNTYDVNYAGNNKFVVSYASETALIISNINVDEEGDKT 192
           +NFFSKENGICEEFSLIGTKQEGNTYDVNYAGNNKFVVSYASETALIISNINVDEEGDKT
Sbjct: 53  LNFFSKENGICEEFSLIGTKQEGNTYDVNYAGNNKFVVSYASETALIISNINVDEEGDKT 112

Query: 193 IMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIK 309
           IMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNII+
Sbjct: 113 IMTGLLGKGTDIEDQDLEKFKEVTRENGIPEENIVNIIE 151